Syntenin (SDCBP) (NM_005625) Human Untagged Clone

CAT#: SC108554

SDCBP (untagged)-Human syndecan binding protein (syntenin) (SDCBP), transcript variant 1

Specifications

Product Data

• Type: Human Untagged Clone
• Tag: Tag Free
• Symbol: SDCBP
• Synonyms: MDA-9; MDA9; ST1; SYCL; TACIP18
• Vector: pCMV6-XL5
• E. coli Selection: Ampicillin (100 ug/mL)
• Mammalian Cell Selection: None
• Sequence Data:
  Fully Sequenced ORF

  >OriGene ORF within SC108554 sequence for NM_005625 edited (data generated by NextGen Sequencing)
  ATGTCTCTCTATCCATCTCTCGAAGACTTGAAGGTAGACAAAGTAATTCAGGCTCAAACT
  GCTTTTTCTGCAAACCCTGCCAATCCAGCAATTTTGTCAGAAGCTTCTGCTCCTATCCCT
  CACGATGGAAATCTCTATCCCAGACTGTATCCAGAGCTCTCTCAATACATGGGGCTGAGT
  TTAAATGAAGAAGAAATACGTGCAAATGTGGCCGTGGTTTCTGGTGCACCACTTCAGGGG
  CAGTTGGTAGCAAGACCTTCCAGTATAAACTATATGGTGGCTCCTGTAACTGGTAATGAT
  GTTGGAATTCGTAGAGCAGAAATTAAGCAAGGGATTCGTGAAGTCATTTTGTGTAAGGAT
  CAAGATGGAAAAATTGGACTCAGGCTTAAATCAATAGATAATGGTATATTTGTTCAGCTA
  GTCCAGGCTAATTCTCCAGCCTCATTGGTTGGTCTGAGATTTGGGGACCAAGTACTTCAG
  ATCAATGGTGAAAACTGTGCAGGATGGAGCTCTGATAAAGCGCACAAGGTGCTCAAACAG
  GCTTTTGGAGAGAAGATTACCATGACCATTCGTGACAGGCCCTTTGAACGGACGATTACC
  ATGCATAAGGATAGCACTGGACATGTTGGTTTTATCTTTAAAAATGGAAAAATAACATCC
  ATAGTGAAAGATAGCTCTGCAGCCAGAAATGGTCTTCTCACGGAACATAACATCTGTGAA
  ATCAATGGACAGAATGTCATTGGATTGAAGGACTCTCAAATTGCAGACATACTGTCAACA
  TCTGGGACTGTAGTTACTATTACAATCATGCCTGCTTTTATCTTTGAACATATTATTAAG
  CGGATGGCACCAAGCATTATGAAAAGCCTAATGGACCACACCATTCCTGAGGTTTAA
  
  Clone variation with respect to NM_005625.3
  
  5' Read Nucleotide Sequence

  >OriGene 5' read for NM_005625 unedited
  GCATTTGTATACGACTCCTATAGGCGGCCCGCGAATTCGCACGAGGCGGCGGCGGCGAGC
  GGTTCCTTGTGGGCTAGAAGAATCCTGCAAAAAGTCTCTCTATCCATCTCTCGAAGACTT
  GAAGGTAGACAAAGTAATTCAGGCTCAAACTGCTTTTTCTGCAAACCCTGCCAATCCAGC
  AATTTTGTCAGAAGCTTCTGCTCCTATCCCTCACGATGGAAATCTCTATCCCAGACTGTA
  TCCAGAGCTCTCTCAATACATGGGGCTGAGTTTAAATGAAGAAGAAATACGTGCAAATGT
  GGCCGTGGTTTCTGGTGCACCACTTCAGGGGCAGTTGGTAGCAAGACCTTCCAGTATAAA
  CTATATGGTGGCTCCTGTAACTGGTAATGATGTTGGAATTCGTAGAGCAGAAATTAAGCA
  AGGGATTCGTGAAGTCATTTTGTGTAAGGATCAAGATGGAAAAATTGGACTCAGGCTTAA
  ATCAATAGATAATGGTATATTTGTTCAGCTAGTCCAGGCTAATTCTCCAGCCTCATTGGT
  TGGTCTGAGATTTGGGGACCAAGTACTTCAGATCAATGGTGAAAACTGTGCAGGATGGAG
  CTCTGATAAAGCGCACAAGGTGCTCAAACAGGCTTTTGGAGAGAAGATTACCATGACCAT
  TCGTGACAGGCCCTTTGAACGGACGATTACCATGCATAAGGATAGCACTGGACATGTTGG
  TTNTATCTTTANAATGGAAAAATACATCCATAGTGAAAGATAGCTCTGCAGCCAGAAATG
  GTCTTCTCACGGACATAACATCTGTGAAATCAATGGACAGAATGTCATTGGNATGAAAGG
  ACTCTCAATGCAGACTACTGTCACATCTGGGACTGTAGNTACTATTACAATCATGCTGCT
  TTNATCTTNGACATATTATAAGCGGATGGCACCAGCATATGANAGCCTATGGACACACAT
  CC
  
  3' Read Nucleotide Sequence

  >OriGene 3' read for NM_005625 unedited
  CGCAATCTANAGTCGAGTTTTTTTTTTTTTTTTTTGACAGACTAAAATGTAACTTTATTT
  ATACATATTTAATTAGAATAGACATAAACCAAAAAGAAGAAAAAAATCAGGATAAAGTGT
  CAACTATCATTTTGTTTGCAAGGAGGAGTCAGGAAAAGGAACAAGTTATCAGAAAAATAT
  TCTAAGACCATCCCAAAGTAGCTAGGTTACATAATCTTAAGAGTCAAATGCCAAAATTAA
  GTATTATACCACTTAATCCACAAATGAACAAAAGGGGAGTCAAAAGTTTATCCTGTTTAG
  TGTAATAACTTTTACATCACATATAGTGATTCACTTCTTAAAAGTGGCACTGGCAACTTT
  TAGAAGAAAGAAGTTTCCATTATGTGTTGACTAAAAAATCTCAAAAACAACTAAGCAGCT
  ATGCTATAGCTCAGTAAGTACCATTAAACTGTTCTGGGCTAGTGTACATTTCAGGTTAAT
  AGAGAACTACATTTTGGGTTTTTAGAAAGGCAGCAATAATTATATTTTGGCTTTTAGTCT
  AGATGCTTAACATAGTTAAGGCGACAGTTCAAGCATATTAAGTGAAGGTAGTTAAAATTT
  AAGAATCATCACAATCTCTTGAACCCTACATACACTGTNTAATGCTTACATGGAATGAAA
  CTAGTGTTCTTAATTGGCATTTCCACACACACCCACAGAANTTTAAAAAAAATCAAAGGG
  CATCATTCTAAAGTACTATGATAGCATGCTAAAGAGCAAGTATGCTATANCACCTAAAGT
  ATATGAACAGCACTACTCATTACCTAGGAGAAGAGGGACTGTNTTTCACACAAAGCTAAG
  CCTGTAACAGTCATCCCTAACACCATGCCTTATAAAAGCTCAGGNTTTCAGNTAAAAAAC
  CATCCTAGAAAGTCCGTAAATCTCTTGAAAGTTACACTTTGAAACCCGCGATAGGCTCCA
  ACTTTTGGAATTCTGACACGTTTACAAAGAAGAGCAATATCCCACCNTATGCAAACACAA
  GGGCCCCTGCCG
  
• Restriction Sites: NotI-NotI
• ACCN: NM_005625
• Insert Size: 2110 bp
• OTI Disclaimer: Our molecular clone sequence data has been matched to the reference identifier above as a point of reference. Note that the complete sequence of our molecular clones may differ from the sequence published for this corresponding reference, e.g., by representing an alternative RNA splicing form or single nucleotide polymorphism (SNP).
• Product Components: The cDNA clone is shipped in a 2-D bar-coded Matrix tube as dried plasmid DNA. The package also includes 100 pmols of both the corresponding 5' and 3' vector primers in separate vials. Every lot of primer is tested to provide clean sequencing of OriGene TrueClones.
• Reconstitution: 1. Centrifuge at 5,000xg for 5min.
  2. Carefully open the tube and add 100ul of sterile water to dissolve the DNA.
  3. Close the tube and incubate for 10 minutes at room temperature.
  4. Briefly vortex the tube and then do a quick spin (less than 5000xg) to concentrate the liquid at the bottom.
  5. Store the suspended plasmid at -20°C. The DNA is stable for at least one year from date of shipping when stored at -20°C.

Reference Data

• RefSeq: NM_005625.3, NP_005616.2
• RefSeq Size: 2173 bp
• RefSeq ORF: 897 bp
• Locus ID: 6386
• Cytogenetics: 8q12.1
• Domains: PDZ
• Protein Families: Druggable Genome, Transmembrane
• Gene Summary: 'The protein encoded by this gene was initially identified as a molecule linking syndecan-mediated signaling to the cytoskeleton. The syntenin protein contains tandemly repeated PDZ domains that bind the cytoplasmic, C-terminal domains of a variety of transmembrane proteins. This protein may also affect cytoskeletal-membrane organization, cell adhesion, protein trafficking, and the activation of transcription factors. The protein is primarily localized to membrane-associated adherens junctions and focal adhesions but is also found at the endoplasmic reticulum and nucleus. Alternative splicing results in multiple transcript variants encoding different isoforms. Related pseudogenes have been identified on multiple chromosomes. [provided by RefSeq, Jan 2017]'
  Transcript Variant: This variant (1) represents the longest transcript. Variants 1 and 2 encode the same, longest isoform (isoform 1).