UAP56 (DDX39B) (NM_080598) Human Untagged Clone

CAT#: SC109914

DDX39B (untagged)-Human DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B (DDX39B), transcript variant 2

Specifications

Product Data

• Type: Human Untagged Clone
• Tag: Tag Free
• Symbol: DDX39B
• Synonyms: BAT1; D6S81E; UAP56
• Vector: pCMV6-XL5
• E. coli Selection: Ampicillin (100 ug/mL)
• Mammalian Cell Selection: None
• Sequence Data:
  Fully Sequenced ORF

  >NCBI ORF sequence for NM_080598, the custom clone sequence may differ by one or more nucleotides
  
  
  ATGGCAGAGAACGATGTGGACAATGAGCTCTTGGACTATGAAGATGATGAGGTGGAGACAGCAGCTGGGG
  GAGATGGGGCTGAGGCCCCTGCCAAGAAGGATGTCAAGGGCTCCTATGTCTCCATCCACAGCTCTGGCTT
  TCGTGACTTCCTGCTCAAGCCAGAGTTGCTCCGGGCCATTGTCGACTGTGGCTTTGAGCATCCGTCAGAA
  GTCCAGCATGAGTGCATCCCTCAGGCCATTCTGGGAATGGATGTCCTGTGCCAGGCCAAGTCGGGCATGG
  GAAAGACAGCAGTGTTTGTCTTGGCCACACTGCAACAGCTGGAGCCAGTTACTGGGCAGGTGTCTGTACT
  GGTGATGTGTCACACTCGGGAGTTGGCTTTTCAGATCAGCAAGGAATATGAGCGCTTCTCTAAATACATG
  CCCAATGTCAAGGTTGCTGTTTTTTTTGGTGGTCTGTCTATCAAGAAGGATGAAGAGGTGCTGAAGAAGA
  ACTGCCCGCATATCGTCGTGGGGACTCCAGGCCGTATCCTAGCCCTGGCTCGAAATAAGAGCCTCAACCT
  CAAACACATTAAACACTTTATTTTGGATGAATGTGATAAGATGCTTGAACAGCTCGACATGCGTCGGGAT
  GTCCAGGAAATTTTTCGCATGACCCCCCACGAGAAGCAGGTCATGATGTTCAGTGCTACCTTGAGCAAAG
  AGATCCGTCCAGTCTGCCGCAAGTTCATGCAAGATCCAATGGAGATCTTCGTGGATGATGAGACGAAGTT
  GACGCTGCATGGGTTGCAGCAGTACTACGTGAAACTGAAGGACAACGAGAAGAACCGGAAGCTCTTTGAC
  CTTCTGGATGTCCTTGAGTTCAACCAGGTGGTGATCTTTGTGAAGTCTGTGCAGCGGTGCATTGCCTTGG
  CCCAGCTACTAGTGGAGCAGAACTTCCCAGCCATTGCCATCCACCGTGGGATGCCCCAGGAGGAGAGGCT
  TTCTCGGTATCAGCAGTTTAAAGATTTTCAACGACGAATTCTTGTGGCTACCAACCTATTTGGCCGAGGC
  ATGGACATCGAGCGGGTGAACATTGCTTTTAATTATGACATGCCTGAGGATTCTGACACCTACCTGCATC
  GGGTGGCCAGAGCAGGCCGGTTTGGCACCAAGGGCTTGGCTATCACATTTGTGTCCGATGAGAATGATGC
  CAAGATCCTCAATGATGTGCAGGATCGCTTTGAGGTCAATATTAGTGAGCTGCCTGATGAGATAGACATC
  TCCTCCTACATTGAACAGACACGGTAG
  
  
  5' Read Nucleotide Sequence

  >OriGene 5' read for NM_080598 unedited
  CACTATAGGGCGGCACGCCAATTCGGCACGAGGCTTCGCTACAATCCGTTTCCATCTGCG
  CTTCTCCGCACCCATCCCGTCCATGGGTTCCTGATACCCTTTTCACAGGCGATGGTCTGG
  TCGCTGGGGCCTAGTTGGGTGGAGACATGAATTTTGTTTTTTTGTGGCCGAGCCATTTGT
  CTTGCACCGTCTTTTCCCCCCATGCTAATTACACAAGGCTTGCTTAAACAGCGGAAGGGA
  GGATACTGAGAAGTGGGAGGCTGAGAGCTATGGGAGGTGGACGGCGGCCATATGATGTTT
  TCTTTTCGAAAGCTCTTCTGTTAGAAATAGTATCTTTGTTTTCCTTTGCTGTTCCTCAAT
  CCCCTACTCTTCACCCCTTGTTTTCACCTATTTTGCGAGAACCCATCCAGATCCCCCTTC
  CCTTCTTCCCCTGCCGGCCCAGTTATGGCAGAGAACGATGTGGACAATGAGCTCTTGGAC
  TATGAAGATGATGAGGTGGAGACAGCAGCTGGGGGAGATGGGGCTGAGGCCCCTGCCAAG
  AAGGATGTCAAGGGCTCCTATGTCTCCATCCACAGCTCTGGCTTTCGTGACTTCCTGCTC
  AAGCCAGAGTTGCTCCGGGCCATTGTCGACTGTGGCTTTGAGCATCCGTCAGAAGTCCAG
  CATGAGTGCATCCCTCAGGCCATTCTGGGAATGGATGTCCTGTGCCAGGCCAAGTCGGGC
  ATGGGAAAGACAGCAGTGTTTGTCTTGGCCACACTGCAACAGCTGGAGCCAGTTACTGGG
  CANGTGTCTGTGCTGGTGATGTGTCACACTCGGGAGTTGGCTTTTCAGATTCAGCAGGGA
  TATGAGCGCTTCTCTNATN
  
  3' Read Nucleotide Sequence

  >OriGene 3' read for NM_080598 unedited
  CCGCGGCACGCAATCTAGNATCGAGTTTTTTTTTTTTTTTTTTAGATACCACANACACAT
  GTGTTTCATTTTTAGTTTTGTTAAAAAAAATTCTGACAAATCAGAAATGGGGGTTCAGGA
  GTGGTGGTGATGCAAAAGATGGAAGCCATGGGGTGGGGGCTGTCAGGGGTGGGGGCAGTA
  GTGTCTCCTTCACCCCCACCCTGGTGTCCTCTCCTGAAGGACAGACGGTCACATTCCAAA
  ATGGGCGAGTCTTCTACCGTGTCTGTTCAATGTAGGAGGAGATGTCTATCTCATCAGGCA
  GCTCACTAATATTGACCTCAAAGCGATCCTGCACATCATTGAGGATCTTGGCATCATTCT
  CATCGGACACAAATGTGATAGCCAAGCCCTTGGTGCCAAACCGGCCTGCTCTGGCCACCC
  GATGCAGGTAGGTGTCAGAATCCTCAGGCATGTCATAATTAAAAGCAATGTTCACCCGCT
  CGATGTCCATGCCTCGGCCAAATAGGTTGGTAGCCACAAGAATTCGTCGTTGAAAATCTT
  TAAACTGCTGATACCGAGAAAGCCTCTCCTCCTGGGGCATCCCACGGTGGATGGCAATGG
  CTGGGAAGTTCTGCTCCACTAGTAGCTGGGCCAAGGCAATGCACCGCTGCACAGACTTCA
  CAAAGATCACCACCTGGTTGAACTCAAGGACATCCAGAAAGTCAAAGAGCTTCCGGTTCT
  TCTCGTTGTCCTTTCAGTTCACGTAGTACTGCTGCAACCCATGCAGCGTCAACTTCGTCT
  CATCATCCACGAAGATCTNCATTGGATCTTGCATGAACTTGCGGCAGACTGGACGGATCT
  CTTTGCTCAGGTANCACTNGACATCATGACCTGCTTTCGTGGGGGGTCATGCGAAAAATT
  NCTGGACATCCGACGCTGTCGAGCTGTTCAGCATCTTATACATTCTNCCAAATAG
  
• Restriction Sites: NotI-NotI
• ACCN: NM_080598
• ORF Size: 1287 bp
• Insert Size: 1920
• OTI Disclaimer: Our molecular clone sequence data has been matched to the reference identifier above as a point of reference. Note that the complete sequence of our molecular clones may differ from the sequence published for this corresponding reference, e.g., by representing an alternative RNA splicing form or single nucleotide polymorphism (SNP).

Reference Data

• RefSeq: NM_080598.3, NP_542165.1
• RefSeq Size: 2044
• RefSeq ORF: 1287
• Locus ID: 7919
• Domains: DEAD, helicase_C
• Protein Pathways: Spliceosome
• Gene Summary: This gene encodes a member of the DEAD box family of RNA-dependent ATPases that mediate ATP hydrolysis during pre-mRNA splicing. The encoded protein is an essential splicing factor required for association of U2 small nuclear ribonucleoprotein with pre-mRNA, and it also plays an important role in mRNA export from the nucleus to the cytoplasm. This gene belongs to a cluster of genes localized in the vicinity of the genes encoding tumor necrosis factor alpha and tumor necrosis factor beta. These genes are all within the human major histocompatibility complex class III region. Mutations in this gene may be associated with rheumatoid arthritis. Alternative splicing results in multiple transcript variants. Related pseudogenes have been identified on both chromosomes 6 and 11. Read-through transcription also occurs between this gene and the upstream ATP6V1G2 (ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2) gene. [provided by RefSeq, Feb 2011]
  Transcript Variant: This variant (2) uses an alternative splice site in the 5' UTR, compared to variant 1. Both variants 1 and 2 encode the same protein.