SS18 (NM_005637) Human Untagged Clone

CAT#: SC127009

SS18 (untagged)-Human synovial sarcoma translocation, chromosome 18 (SS18), transcript variant 2

Specifications

Product Data

• Type: Human Untagged Clone
• Tag: Tag Free
• Symbol: SS18
• Synonyms: SSXT; SYT
• Vector: pCMV6-XL5
• E. coli Selection: Ampicillin (100 ug/mL)
• Mammalian Cell Selection: None
• Sequence Data:
  Fully Sequenced ORF

  >OriGene ORF within SC127009 sequence for NM_005637 edited (data generated by NextGen Sequencing)
  ATGTCTGTGGCTTTCGCGGCCCCGAGGCAGCGAGGCAAGGGGGAGATCACTCCCGCTGCG
  ATTCAGAAGATGTTGGATGACAATAACCATCTTATTCAGTGTATAATGGACTCTCAGAAT
  AAAGGAAAGACCTCAGAGTGTTCTCAGTATCAGCAGATGTTGCACACAAACTTGGTATAC
  CTTGCTACAATAGCAGATTCTAATCAAAATATGCAGTCTCTTTTACCAGCACCACCCACA
  CAGAATATGCCTATGGGTCCTGGAGGGATGAATCAGAGCGGCCCTCCCCCACCTCCACGC
  TCTCACAACATGCCTTCAGATGGAATGGTAGGTGGGGGTCCTCCTGCACCGCACATGCAG
  AACCAGATGAACGGCCAGATGCCTGGGCCTAACCATATGCCTATGCAGGGACCTGGACCC
  AATCAACTCAATATGACAAACAGTTCCATGAATATGCCTTCAAGTAGCCATGGATCCATG
  GGAGGTTACAACCATTCTGTGCCATCATCACAGAGCATGCCAGTACAGAATCAGATGACA
  ATGAGTCAGGGACAACCAATGGGAAACTATGGTCCCAGACCAAATATGAGTATGCAGCCA
  AACCAAGGTCCAATGATGCATCAGCAGCCTCCTTCTCAGCAATACAATATGCCACAGGGA
  GGCGGACAGCATTACCAAGGACAGCAGCCACCTATGGGAATGATGGGTCAAGTTAACCAA
  GGCAATCATATGATGGGTCAGAGACAGATTCCTCCCTATAGACCTCCTCAACAGGGCCCA
  CCACAGCAGTACTCAGGCCAGGAAGACTATTACGGGGACCAATACAGTCATGGTGGACAA
  GGTCCTCCAGAAGGCATGAACCAGCAATATTACCCTGATGGAAATTCACAGTATGGCCAA
  CAGCAAGATGCATACCAGGGACCACCTCCACAACAGGGATATCCACCCCAGCAGCAGCAG
  TACCCAGGGCAGCAAGGTTACCCAGGACAGCAGCAGGGCTACGGTCCTTCACAGGGTGGT
  CCAGGTCCTCAGTATCCTAACTACCCACAGGGACAAGGTCAGCAGTATGGAGGATATAGA
  CCAACACAGCCTGGACCACCACAGCCACCCCAGCAGAGGCCTTATGGATATGACCAGGGA
  CAGTATGGAAATTACCAGCAGTGA
  
  Clone variation with respect to NM_005637.2
  
  5' Read Nucleotide Sequence

  >OriGene 5' read for NM_005637 unedited
  CGACTTACTATAGGGCGGCCGCGAATTCGGCACGAGGGACGGCGGCAACATGTCTGTGGC
  TTTCGCGGCCCCGAGGCAGCGAGGCAAGGGGGAGATCACTCCCGCTGCGATTCAGAAGAT
  GTTGGATGACAATAACCATCTTATTCAGTGTATAATGGACTCTCAGAATAAAGGAAAGAC
  CTCAGAGTGTTCTCAGTATCAGCAGATGTTGCACACAAACTTGGTATACCTTGCTACAAT
  AGCAGATTCTAATCAAAATATGCAGTCTCTTTTACCAGCACCACCCACACAGAATATGCC
  TATGGGTCCTGGAGGGATGAATCAGAGCGGCCCTCCCCCACCTCCACGCTCTCACAACAT
  GCCTTCAGATGGAATGGTAGGTGGGGGTCCTCCTGCACCGCACATGCAGAACCAGATGAA
  CGGCCAGATGCCTGGGCCTAACCATATGCCTATGCAGGGACCTGGACCCAATCAACTCAA
  TATGACAAACAGTTCCATGAATATGCCTTCAAGTAGCCATGGATCCCATGGGAGGTTACA
  ACCATTCTGTGCCATCATCACAGAGCATGCCAGTACAGAATCAGATGACAATGAGTCAGG
  GACAACCAATGGGAAACTATGGTCCCAGACCAAATATGAGTATGCAGCCAAACCAAGGTC
  CAATGATGCATCAGCAGCCTCCTTCTCAGCATACAATATGCCACAGGNAGGGCGGACAGC
  ATTACCAAGGACAGCAGCCCCTTGGGGAATGGATGGGGTCAAGTTAACCAAGGCATCATA
  TGATGGGGTCAGAGACAGATTCCTCCTATAGACCTNCTCACAGGGCCACCACAGCAGTAC
  TCAGCCCAGAGAATATTTACGGGGACCATCATNCATGGGGGGACAGGTCTTCAGAAGCAT
  GACCACATATACCCCTGATGGCTAAGAGAATACGGTATAAACAACGGCGTATCTGACAAG
  CTCCAAGGCCTTTAGAAGA
  
  3' Read Nucleotide Sequence

  >OriGene 3' read for NM_005637 unedited
  GCCGCAATCTAGAGTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA
  AAACACAAATAATTTATTCTTCCGTTAAAGTTGATACAGTTTTAAATAGCAACAAAGTAC
  ACAGGGGGGGAAAATTGGCACAAAACCTACAAGCATTTCAATCACAATAAGGCTGTCCAT
  GATTTATCTGTTCAAACTTGATGTCCATTTTCTACTGATCAAGTTGAAAAAAAAAACCTA
  TTCTGGCCAGGCACGGGGGCTCACGCCTGTAATCCCAACACTTTGGAAGGCCGAGGCGGG
  TGGATCACCTGAGGTCAGGAGTTCAAAACCAGCCTGGCCAACATGGCGAAACCTCGTTTT
  TACTAAAAGTACAAAAATTACCTGGGTGTGGGGGCGGGTGCCTGTCATCCCACCTACTCA
  GGAGGCTGAGGCAGGAAAACTGCTTGAACCCTGGGAGGCGGAGGTTGCACTGACCTGAAA
  TTGCCCCACTGCACTCCAACCTGGGCGACAAGAGCAAGACTCCTTTTCAAAAAAAAAACC
  CGGACCAAAAACCAAACCCCAAAAACCTGTTTTGACCTTAAAAACACAAACACACACTTT
  TTTTTTATACACACACAGAAACCCCCTGAAATTCCCCCTTTTGATTCCAGAATGGTGAAA
  ACAATATGTCCTGCTTTATCAAATTTATGACCCCCCTTCTGTTTTTGTTTTCACTTAGAC
  CGGGGAAAACCCATTCCCTTATAAAAAATCCTTTTTTTCCCTGGGCTTGCCACCGGGAGA
  AAAAACCAACTACCTTTGGCCTAAAGTTTTAAATTTGCTTAAAACCCGGGTAAAAATTTA
  AAGGATGCTTCCGGCCCCCCAATTCCTTGATTTCTAAAACACCGGCACGGAATTCTAAAA
  ATGGATAACAATCCCTGCCAAAAAAAGGTTCTAAAAGCCCCCTCCGTCTTAAACAAT
  
• Restriction Sites: NotI-NotI
• ACCN: NM_005637
• Insert Size: 3670 bp
• OTI Disclaimer: Our molecular clone sequence data has been matched to the reference identifier above as a point of reference. Note that the complete sequence of our molecular clones may differ from the sequence published for this corresponding reference, e.g., by representing an alternative RNA splicing form or single nucleotide polymorphism (SNP).
• Product Components: The cDNA clone is shipped in a 2-D bar-coded Matrix tube as dried plasmid DNA. The package also includes 100 pmols of both the corresponding 5' and 3' vector primers in separate vials. Every lot of primer is tested to provide clean sequencing of OriGene TrueClones.
• Reconstitution: 1. Centrifuge at 5,000xg for 5min.
  2. Carefully open the tube and add 100ul of sterile water to dissolve the DNA.
  3. Close the tube and incubate for 10 minutes at room temperature.
  4. Briefly vortex the tube and then do a quick spin (less than 5000xg) to concentrate the liquid at the bottom.
  5. Store the suspended plasmid at -20°C. The DNA is stable for at least one year from date of shipping when stored at -20°C.

Reference Data

• RefSeq: NM_005637.2, NP_005628.2
• RefSeq Size: 3347 bp
• RefSeq ORF: 1164 bp
• Locus ID: 6760
• Cytogenetics: 18q11.2
• Domains: SSXT
• Protein Families: Druggable Genome
• Gene Summary: ''
  Transcript Variant: This variant (2) lacks an in-frame exon in the 3' coding region, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.