ATG16L1 (NM_198890) Human Untagged Clone

CAT#: SC127733

ATG16L1 (untagged)-Human ATG16 autophagy related 16-like 1 (S. cerevisiae) (ATG16L1), transcript variant 3

Specifications

Product Data

• Type: Human Untagged Clone
• Tag: Tag Free
• Symbol: ATG16L1
• Synonyms: APG16L; ATG16A; ATG16L; IBD10; WDR30
• Vector: pCMV6-XL4
• E. coli Selection: Ampicillin (100 ug/mL)
• Mammalian Cell Selection: None
• Sequence Data:
  Fully Sequenced ORF

  >OriGene ORF within SC127733 sequence for NM_198890 edited (data generated by NextGen Sequencing)
  ATGTCGTCGGGCCTCCGCGCCGCTGACTTCCCCCGCTGGAAGCGCCACATCTCGGAGCAA
  CTGAGGCGCCGGGACCGGCTGCAGAGACAGGCGTTCGAGGAGATCATCCTGCAGTATAAC
  AAATTGCTGGAAAAGTCAGATCTTCATTCAGTGTTGGCCCAGAAACTACAGGCTGAAAAG
  CATGACGTACCAAACAGGCACGAGATAAGNNNNNNGCAAGCCCGGCTGCAGAAAGAGCTT
  GCAGAAGCAGCAAAGGAACCTCTACCAGTCGAACAGGATGATGACATTGAGGTCATTGTG
  GATGAAACTTCTGATCACACAGAAGAGACCTCTCCTGTGCGAGCCATCAGCAGAGCAGCC
  ACGAGACGCTCTGTCTCTTCCTTCCCAGTCCCCCAGGACAATGTGGATACTCATCCTGGT
  TCTGGTAAAGAAGTGAGGGTACCAGCTACTGCCTTGTGTGTCTTCGATGCACATGATGGG
  GAAGTCAACGCTGTGCAGTTCAGTCCAGGTTCCCGGTTACTGGCCACTGGAGGCATGGAC
  CGCAGGGTTAAGCTTTGGGAAGTATTTGGAGAAAAATGTGAGTTCAAGGGTTCCCTATCT
  GGCAGTAATGCAGGAATTACAAGCATTGAATTTGATAGTGCTGGATCTTACCTCTTAGCA
  GCTTCAAATGATTTTGCAAGCCGAATCTGGACTGTGGATGATTATCGATTACGGCACACA
  CTCACGGGACACAGTGGGAAAGTGCTGTCTGCTAAGTTCCTGCTGGACAATGCGCGGATT
  GTCTCAGGAAGTCACGACCGGACTCTCAAACTCTGGGATCTACGCAGCAAAGTCTGCATA
  AAGACAGTGTTTGCAGGATCCAGTTGCAATGATATTGTCTGCACAGAGCAATGTGTAATG
  AGTGGACATTTTGACAAGAAAATTCGTTTCTGGGACATTCGATCAGAGAGCATAGTTCGA
  GAGATGGAGCTGTTGGGAAAGATTACTGCCCTGGACTTAAACCCAGAAAGGACTGAGCTC
  CTGAGCTGCTCCCGTGATGACTTGCTAAAAGTTATTGATCTCCGAACAAATGCTATCAAG
  CAGACATTCAGTGCACCTGGGTTCAAGTGCGGCTCTGACTGGACCAGAGTTGTCTTCAGC
  CCTGATGGCAGTTACGTGGCGGCAGGCTCTGCTGAGGGCTCTCTGTATATCTGGAGTGTG
  CTCACAGGGAAAGTGGAAAAGGTTCTTTCAAAGCAGCACAGCTCATCCATCAATGCGGTG
  GCGTGGTCGCCCTCTGGCTCGCACGTTGTCAGTGTGGACAAAGGATGCAAAGCTGTGCTG
  TGGGCACAGTACTGA
  
  Clone variation with respect to NM_198890.2
  210 g=>n;211 a=>n;212 g=>n;213 g=>n;214 c=>n;215 g=>n
  5' Read Nucleotide Sequence

  >OriGene 5' read for NM_198890 unedited
  CACTATAGGGCGGCCGCGAATTCGCACGAGGGGAAGACCGTCCCGGATGGCCTCGGGGAC
  TGCCAGTGTGTGGAGGTGAGCTCCGGGATTGCCGGCATTCCCGCTTCTGCTGGTTGCTTC
  ATGCTGCAGGCTGCGGCCGTCAGCCCTCGCTCGCATTGGTGGCGCTGAGGTGCCGGGGCA
  GCAAGTGACATGTCGTCGGGCCTCCGCGCCGCTGACTTCCCCCGCTGGAAGCGCCACATC
  TCGGAGCAACTGAGGCGCCGGGACCGGCTGCAGAGACAGGCGTTCGAGGAGATCATCCTG
  CAGTATAACAAATTGCTGGAAAAGTCAGATCTTCATTCAGTGTTGGCCCAGAAACTACAG
  GCTGAAAAGCATGACGTACCAAACAGGCACGAGATAAGTCCCGGACATGATGGCACATGG
  AATGACAATCAGCTACAAGAAATGGCCCAACTGAGGATTAAGCACCAAGAGGAACTGACT
  GAATTACACAAGAAACGTGGGGAGTTAGCTCAACTGGTGATTGACCTGAATAACCAAATG
  CAGCGGAAGGACAGGGAGATGCAGATGAATGAAGCAAAAATTGCAGAATGTTTGCAGACT
  ATCTCTGACCTGGAGACGGAGTGCCTAGACCTGCGCACTAAGCTTTGTGACCTTGAAAGA
  GCCAACCAGACCCTGAAGGATGAATATGATGCCCTGCAGATCACTNTTACTGCCTTGGAG
  GGAAAACTGANGAAAACTACGGAAGAAGACCANGAGCTGGTCACCAGATGGATGGCTGAN
  AAAGCCCAGGAGCCAATCGGCTTATGCAGAGATGAAAAAGATCCAGGAGGCGCAAGCCCC
  GCTGCAGAAAGAGCTGCAAAGCAGCAAGGACCTCTACC
  
  3' Read Nucleotide Sequence

  >OriGene 3' read for NM_198890 unedited
  TCTATGCNACCGCGGCCGCAATCTANAGTCGAGTTTTTTTTTTTTTTTTTTGAAAGTATA
  TAACAGATTTCTTTATTATTATTTACAATCAAGTTCTGTTGGCCAACATAATGAAATAAA
  TAAAAGATGTGCCCTGGCCTGTGAATTTCAACTCTCCTTGACTTAAGTTCTCTGAAGGGC
  AAATTGGAAAGCGGTGATCAGGCAGGGAAGAGAGGGCAGGTGGAGGCCAGGACCATCGGT
  GGGAAGGCCACCTGACTCCTCTCTCACCAGCTCTAACACTCACATCCCCAAATGTCCAGA
  GAACAAGCATGGAAGAAAAAAAATAAAGTGCAAATTTAAAAGTGATAAAAAGGGTGTTTC
  GCACACCCAATGAACTAAAACTTTATACGTAGGTAAAATAGTAAAGATAAATGTTTTTCC
  TTGGCCTTCATCCAACCCCTGAAACGGAAAGATGGCGCTGCTGTGCTTCTGAGCCTAGGC
  TTCTTGCACTAAAGCACCAAGGGCATCGTACACAGGCTTGGCAGAGGGGCCATGGCCAGA
  ATCACCACCTTCAAACAAGTATGTTTGGAGGTCTCCAATCCCTTGGCCCCCCCAAGCATG
  CACGGTGCCCCCACCTTCCTGGTGTCTGCAGATTGATACAGGAACACATCCTTACCTCTG
  CAGAGAACCCATTCCCTGGAAAAGAATTCACACATTCTTTCCACCCCCAAAAAACCACAA
  ACCAAAAACCATTCTTAAAGCCCCCCGCGATTCTAAATATTTCCAATTTGCGGGCGAAAC
  AAAGCCCCAAGCCCTGAAAACCCGGAACGCAAGCAGGCACTTTCCATCGAATGAACCCAT
  TCTCCCACCCCCCAGTGAGGGTCCGCATTCCGGAGCTTCCGTAATCCAAGCTCCAGCGCG
  TTTCTGGGCCACTCACCCAGCGTTTGCAAATCCCCACGCCAAA
  
• Restriction Sites: NotI-NotI
• ACCN: NM_198890
• ORF Size: 801 bp
• Insert Size: 2500
• OTI Disclaimer: Our molecular clone sequence data has been matched to the reference identifier above as a point of reference. Note that the complete sequence of our molecular clones may differ from the sequence published for this corresponding reference, e.g., by representing an alternative RNA splicing form or single nucleotide polymorphism (SNP).

Reference Data

• RefSeq: NM_198890.1, NP_942593.1
• RefSeq Size: 2897
• RefSeq ORF: 801
• Locus ID: 55054
• Gene Summary: The protein encoded by this gene is part of a large protein complex that is necessary for autophagy, the major process by which intracellular components are targeted to lysosomes for degradation. Defects in this gene are a cause of susceptibility to inflammatory bowel disease type 10 (IBD10). Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jun 2010]
  Transcript Variant: This variant (3) lacks an alternate in-frame segment and an alternate in-frame exon compared to variant 1. The resulting isoform (3) has the same N- and C-termini but is shorter compared to isoform 1.